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NOAA Technical Memorandum NMFS-AFSC-291

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Genetic stock composition analysis of the Chinook salmon bycatch in the Gulf of Alaska walleye pollock (Gadus chalcogrammus) trawl fisheries, 2013


A genetic analysis of samples from the Chinook salmon (Oncorhynchus tshawytscha) bycatch of the 2013 Bering Sea-Aleutian Island (BSAI) trawl fishery for walleye pollock (Gadus chalcogrammus) was undertaken to determine the overall stock composition of the bycatch. Samples were genotyped for 43 single nucleotide polymorphism (SNP) DNA markers and results were estimated using the Alaska Department of Fish and Game (ADF&G) SNP baseline.

In 2013, genetic samples from the Bering Sea were collected using a systematic random sampling protocol where one out of every 10 Chinook salmon encountered was sampled. Based on the analysis of 1,246 Chinook salmon bycatch samples collected throughout the 2013 BSAI walleye pollock trawl fishery, Coastal Western Alaska stocks dominated the sample set (50%) with smaller contributions from British Columbia (16%), North Alaska Peninsula (14%), and West Coast U.S. (OR/CA/WA) (7%) stocks. Analysis of temporal groupings within the pollock “A” and “B” seasons revealed changes in stock composition during the course of the year with lower contributions of North Alaska Peninsula and Upper Yukon stocks and higher contributions of West Coast U.S. and NW Gulf of Alaska stocks during the “B” season.

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